Skip to main content

Table 4 Data collection and Refinement Statistics for Ypd1-G68Q

From: Role of the highly conserved G68 residue in the yeast phosphorelay protein Ypd1: implications for interactions between histidine phosphotransfer (HPt) and response regulator proteins

Data Collection

 Space group

P3121

 Unit cell dimensions (Å, °)

a = b = 76.7, c = 66.7 and α = β = 90, γ = 120

 Resolution range (Å)

38.36–1.98 (2.051–1.98)a

 Total number of reflections

100,588

 Number of unique reflections

15,936 (1400)

Average redundancy

 % completeness

97 (72)

 Rmerge (%)b

0.051

 CC1/2c

0.879

 Mean I/σI

31 (1.95)

Refinement Statistics

 Resolution Range (Å)

38.36–1.98 (2.051–1.98)

 Rwork (%)d

17.8

 Rfree (%)e

20.7

 Average B-factor (Å2)

23.73

 # of Protein Atoms

1363

 # of Waters

166

 RMSD bond length (Å)

0.010

 RMSD angles (°)

1.0

Ramachandran plot (%)

  Most favored

98.78

  Additionally allowed

1.2

  Disallowed

0

  1. aValues in () are for the highest resolution shell
  2. bRmerge = Σ(I - 〈I〉)I/Σ(I), where I is the intensity measurement of a given reflection and 〈I〉 is the average intensity for multiple measurements of this reflection
  3. cHalf-set correlation coefficient CC1/2 as defined in Karplus and Diederichs [78]
  4. dRwork = Σ||Fo| - |Fc|| / Σ|Fo|, where Fo and Fc are the observed and calculated structure factors respectively
  5. eRfree was calculated with 5% of the diffraction data that were selected randomly and not used throughout refinement