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Fig. 5 | BMC Biochemistry

Fig. 5

From: Effects of protonation on the hydrolysis of triphosphate in vacuum and the implications for catalysis by nucleotide hydrolyzing enzymes

Fig. 5

Transition state of the second step (Wa attack onto γ-metaphosphate) in sequential reactions. a Methyl triphosphate fully de-protonated (number of protons nP = 0), b α-protonated (nP = 1), c β-protonated (nP = 1), d αβ-protonated (nP = 2), e αγ-protonated (nP = 2), f βγ-protonated (nP = 2) and g αβγ-protonated (nP = 3). The distance between the oxygen atom of water Wa and the γ-phosphorus (solid line) is given in Å. The coordination bonds to the Mg2+ are shown as dotted line. The four water molecules coordinating the Mg2+ are not shown, but are present in the calculations

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